| 2013 WCC Baseball Standings | |||
| Team | WCC | PCT | Overall |
| Gonzaga^ | 18-6 | .750 | 32-21-1 |
| BYU | 15-9 | .625 | 32-21 |
| San Diego* | 15-9 | .625 | 37-25 |
| San Francisco | 15-9 | .625 | 35-24 |
| Pepperdine | 13-11 | .542 | 27-23 |
| Loyola Marymount | 12-12 | .500 | 24-27 |
| Saint Mary's | 11-13 | .458 | 21-34 |
| Portland | 8-16 | .333 | 18-36 |
| Santa Clara | 1-23 | .042 | 14-39 |